Export as .swc (standard format for neuroinformatics).
Install these via :
Place in Fiji.app/plugins/ and restart.
| Method | Best for | Accuracy | Time | |--------|----------|----------|------| | | Low cell density, validation | ★★★★★ | Very slow | | Semi-automated (NeuronJ plugin) | Moderate density, branching | ★★★★☆ | Moderate | | Fully automated (Macro + Skeletonize) | High throughput, simple morphologies | ★★★☆☆ | Fast | neurite length measurement imagej
Fails with dense neurite networks (skeletonization merges adjacent processes). Works well for >10 µm spacing between neurites. Export as